Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Gm14724-201ENSMUST00000118400 537 ntBASIC12.97□□□□□ -0.33
Cxcl12P40224 Gm11451-201ENSMUST00000118946 630 ntBASIC12.97□□□□□ -0.33
Cxcl12P40224 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Gm22442-201ENSMUST00000157256 144 ntBASIC12.97□□□□□ -0.33
Cxcl12P40224 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Mir6998-201ENSMUST00000183343 64 ntBASIC12.97□□□□□ -0.33
Cxcl12P40224 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Gm42518-201ENSMUST00000196277 938 ntBASIC12.97□□□□□ -0.33
Cxcl12P40224 Gm2965-201ENSMUST00000198365 343 ntBASIC12.97□□□□□ -0.33
Cxcl12P40224 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.97□□□□□ -0.33
Cxcl12P40224 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cxcl12P40224 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cxcl12P40224 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cxcl12P40224 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cxcl12P40224 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Cxcl12P40224 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cxcl12P40224 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cxcl12P40224 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cxcl12P40224 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.96□□□□□ -0.33
Cxcl12P40224 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.96□□□□□ -0.33
Cxcl12P40224 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Gm12628-201ENSMUST00000122193 382 ntBASIC12.96□□□□□ -0.33
Cxcl12P40224 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.96□□□□□ -0.33
Cxcl12P40224 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Gm23771-201ENSMUST00000178702 110 ntBASIC12.96□□□□□ -0.33
Cxcl12P40224 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Gm27910-201ENSMUST00000185004 107 ntBASIC12.96□□□□□ -0.33
Cxcl12P40224 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.96□□□□□ -0.33
Cxcl12P40224 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.96□□□□□ -0.33
Cxcl12P40224 Gm5455-201ENSMUST00000058710 715 ntBASIC12.96□□□□□ -0.33
Cxcl12P40224 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.96□□□□□ -0.33
Cxcl12P40224 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl12P40224 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Cxcl12P40224 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cxcl12P40224 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cxcl12P40224 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.96□□□□□ -0.34
Cxcl12P40224 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cxcl12P40224 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cxcl12P40224 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.96□□□□□ -0.34
Cxcl12P40224 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cxcl12P40224 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.95□□□□□ -0.34
Cxcl12P40224 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.95□□□□□ -0.34
Cxcl12P40224 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.95□□□□□ -0.34
Cxcl12P40224 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms