Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Timp3P39876 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.41□□□□□ -0.74
Timp3P39876 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Matn2-203ENSMUST00000226766 3252 ntBASIC10.41□□□□□ -0.74
Timp3P39876 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Timp3P39876 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.4□□□□□ -0.74
Timp3P39876 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.4□□□□□ -0.74
Timp3P39876 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Timp3P39876 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.4□□□□□ -0.74
Timp3P39876 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.4□□□□□ -0.74
Timp3P39876 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.4□□□□□ -0.74
Timp3P39876 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.4□□□□□ -0.74
Timp3P39876 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.4□□□□□ -0.74
Timp3P39876 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Gm6023-201ENSMUST00000118217 606 ntBASIC10.4□□□□□ -0.74
Timp3P39876 Gm11591-201ENSMUST00000120063 702 ntBASIC10.4□□□□□ -0.74
Timp3P39876 Gm13786-201ENSMUST00000122371 333 ntBASIC10.4□□□□□ -0.74
Timp3P39876 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.4□□□□□ -0.74
Timp3P39876 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.4□□□□□ -0.74
Timp3P39876 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Timp3P39876 Gm37042-201ENSMUST00000193816 581 ntBASIC10.4□□□□□ -0.74
Timp3P39876 Gm18584-201ENSMUST00000203098 964 ntBASIC10.4□□□□□ -0.74
Timp3P39876 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.4□□□□□ -0.74
Timp3P39876 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.4□□□□□ -0.74
Timp3P39876 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Timp3P39876 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.4□□□□□ -0.74
Timp3P39876 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Timp3P39876 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Timp3P39876 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Timp3P39876 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Timp3P39876 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Timp3P39876 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Timp3P39876 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Timp3P39876 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Timp3P39876 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Timp3P39876 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Timp3P39876 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Timp3P39876 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Timp3P39876 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Timp3P39876 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Timp3P39876 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.4□□□□□ -0.75
Timp3P39876 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Timp3P39876 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Timp3P39876 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Timp3P39876 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Timp3P39876 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.39□□□□□ -0.75
Timp3P39876 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.39□□□□□ -0.75
Timp3P39876 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms