Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.04□□□□□ -0.48
Slc6a11P31650 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Slc6a11P31650 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Slc6a11P31650 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.04□□□□□ -0.48
Slc6a11P31650 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.04□□□□□ -0.48
Slc6a11P31650 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Slc6a11P31650 Gm6983-201ENSMUST00000214912 628 ntBASIC12.04□□□□□ -0.48
Slc6a11P31650 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.04□□□□□ -0.48
Slc6a11P31650 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Slc6a11P31650 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Slc6a11P31650 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.04□□□□□ -0.48
Slc6a11P31650 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Slc6a11P31650 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Slc6a11P31650 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a11P31650 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.03□□□□□ -0.48
Slc6a11P31650 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.03□□□□□ -0.48
Slc6a11P31650 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Slc6a11P31650 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Slc6a11P31650 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Gm5187-201ENSMUST00000117317 991 ntBASIC12.03□□□□□ -0.48
Slc6a11P31650 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.03□□□□□ -0.48
Slc6a11P31650 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Mir3102-201ENSMUST00000175555 104 ntBASIC12.03□□□□□ -0.48
Slc6a11P31650 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.03□□□□□ -0.48
Slc6a11P31650 Gm24196-201ENSMUST00000179161 110 ntBASIC12.03□□□□□ -0.48
Slc6a11P31650 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.03□□□□□ -0.48
Slc6a11P31650 Gm3961-201ENSMUST00000204425 994 ntBASIC12.03□□□□□ -0.48
Slc6a11P31650 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.03□□□□□ -0.48
Slc6a11P31650 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.03□□□□□ -0.48
Slc6a11P31650 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.03□□□□□ -0.48
Slc6a11P31650 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.03□□□□□ -0.48
Slc6a11P31650 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.03□□□□□ -0.48
Slc6a11P31650 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.03□□□□□ -0.48
Slc6a11P31650 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.03□□□□□ -0.48
Slc6a11P31650 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.03□□□□□ -0.48
Slc6a11P31650 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Slc6a11P31650 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a11P31650 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.03□□□□□ -0.48
Slc6a11P31650 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc6a11P31650 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc6a11P31650 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.02□□□□□ -0.48
Slc6a11P31650 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc6a11P31650 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc6a11P31650 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc6a11P31650 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Slc6a11P31650 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.02□□□□□ -0.48
Slc6a11P31650 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Slc6a11P31650 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Slc6a11P31650 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.02□□□□□ -0.49
Slc6a11P31650 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.02□□□□□ -0.49
Slc6a11P31650 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.02□□□□□ -0.49
Slc6a11P31650 Gm27243-201ENSMUST00000183964 521 ntBASIC12.02□□□□□ -0.49
Slc6a11P31650 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Slc6a11P31650 Gm18827-201ENSMUST00000188341 790 ntBASIC12.02□□□□□ -0.49
Slc6a11P31650 Gm44124-201ENSMUST00000204159 472 ntBASIC12.02□□□□□ -0.49
Slc6a11P31650 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.02□□□□□ -0.49
Slc6a11P31650 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.02□□□□□ -0.49
Slc6a11P31650 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.02□□□□□ -0.49
Slc6a11P31650 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms