Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Vcam1P29533 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.49□□□□□ -0.09
Vcam1P29533 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.49□□□□□ -0.09
Vcam1P29533 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Vcam1P29533 Gm29615-201ENSMUST00000185371 697 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Gm28224-201ENSMUST00000186078 697 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Gm29001-201ENSMUST00000186177 697 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Gm28292-201ENSMUST00000186593 697 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Gm28101-201ENSMUST00000187608 697 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Gm29076-201ENSMUST00000187689 697 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Gm28302-201ENSMUST00000187931 697 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Gm28646-201ENSMUST00000188220 697 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Gm28205-201ENSMUST00000189177 697 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Gm29032-201ENSMUST00000189797 697 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Gm28695-201ENSMUST00000190300 697 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Gm37448-201ENSMUST00000192795 697 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Gm37986-201ENSMUST00000193285 383 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Gm18730-201ENSMUST00000218038 343 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Gm26035-201ENSMUST00000083065 308 ntBASIC14.49□□□□□ -0.09
Vcam1P29533 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Vcam1P29533 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Vcam1P29533 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vcam1P29533 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcam1P29533 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vcam1P29533 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcam1P29533 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.48□□□□□ -0.09
Vcam1P29533 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcam1P29533 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Vcam1P29533 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcam1P29533 Gm23949-201ENSMUST00000104027 127 ntBASIC14.48□□□□□ -0.09
Vcam1P29533 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.48□□□□□ -0.09
Vcam1P29533 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.48□□□□□ -0.09
Vcam1P29533 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcam1P29533 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vcam1P29533 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vcam1P29533 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcam1P29533 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vcam1P29533 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcam1P29533 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.48□□□□□ -0.09
Vcam1P29533 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Vcam1P29533 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vcam1P29533 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vcam1P29533 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vcam1P29533 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.47□□□□□ -0.09
Vcam1P29533 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.47□□□□□ -0.09
Vcam1P29533 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vcam1P29533 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vcam1P29533 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Gm11989-201ENSMUST00000117240 672 ntBASIC14.47□□□□□ -0.09
Vcam1P29533 Gm11362-201ENSMUST00000118838 850 ntBASIC14.47□□□□□ -0.09
Vcam1P29533 Gm15711-201ENSMUST00000118889 535 ntBASIC14.47□□□□□ -0.09
Vcam1P29533 Gm12266-201ENSMUST00000120311 962 ntBASIC14.47□□□□□ -0.09
Vcam1P29533 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Gm27627-201ENSMUST00000183644 150 ntBASIC14.47□□□□□ -0.09
Vcam1P29533 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Gm18041-201ENSMUST00000218210 618 ntBASIC14.47□□□□□ -0.09
Vcam1P29533 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.47□□□□□ -0.09
Vcam1P29533 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vcam1P29533 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.47□□□□□ -0.09
Vcam1P29533 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Vcam1P29533 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vcam1P29533 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vcam1P29533 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Vcam1P29533 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms