Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm25214-201ENSMUST00000104573 129 ntBASIC12.63□□□□□ -0.39
Nckap1P28660 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.63□□□□□ -0.39
Nckap1P28660 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.63□□□□□ -0.39
Nckap1P28660 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.63□□□□□ -0.39
Nckap1P28660 Gm14017-201ENSMUST00000121934 386 ntBASIC12.63□□□□□ -0.39
Nckap1P28660 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.63□□□□□ -0.39
Nckap1P28660 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Nckap1P28660 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nckap1P28660 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nckap1P28660 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nckap1P28660 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.63□□□□□ -0.39
Nckap1P28660 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.63□□□□□ -0.39
Nckap1P28660 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.63□□□□□ -0.39
Nckap1P28660 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.63□□□□□ -0.39
Nckap1P28660 Gm44967-201ENSMUST00000207047 631 ntBASIC12.63□□□□□ -0.39
Nckap1P28660 Gm18212-201ENSMUST00000211678 889 ntBASIC12.63□□□□□ -0.39
Nckap1P28660 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.63□□□□□ -0.39
Nckap1P28660 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.63□□□□□ -0.39
Nckap1P28660 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Nckap1P28660 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.63□□□□□ -0.39
Nckap1P28660 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.63□□□□□ -0.39
Nckap1P28660 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.63□□□□□ -0.39
Nckap1P28660 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.63□□□□□ -0.39
Nckap1P28660 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Nckap1P28660 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nckap1P28660 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.62□□□□□ -0.39
Nckap1P28660 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.62□□□□□ -0.39
Nckap1P28660 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.62□□□□□ -0.39
Nckap1P28660 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.62□□□□□ -0.39
Nckap1P28660 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Nckap1P28660 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Nckap1P28660 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nckap1P28660 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Nckap1P28660 Gm14130-201ENSMUST00000118417 987 ntBASIC12.62□□□□□ -0.39
Nckap1P28660 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.62□□□□□ -0.39
Nckap1P28660 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.62□□□□□ -0.39
Nckap1P28660 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.62□□□□□ -0.39
Nckap1P28660 Gm26461-201ENSMUST00000175064 290 ntBASIC12.62□□□□□ -0.39
Nckap1P28660 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nckap1P28660 Gm38317-201ENSMUST00000195564 343 ntBASIC12.62□□□□□ -0.39
Nckap1P28660 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.62□□□□□ -0.39
Nckap1P28660 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nckap1P28660 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.62□□□□□ -0.39
Nckap1P28660 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nckap1P28660 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nckap1P28660 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nckap1P28660 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.62□□□□□ -0.39
Nckap1P28660 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.62□□□□□ -0.39
Nckap1P28660 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nckap1P28660 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.61□□□□□ -0.39
Nckap1P28660 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms