Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
BgnP28653 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BgnP28653 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.72□□□□□ -0.53
BgnP28653 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
BgnP28653 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BgnP28653 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
BgnP28653 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.71□□□□□ -0.53
BgnP28653 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.71□□□□□ -0.53
BgnP28653 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
BgnP28653 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
BgnP28653 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.71□□□□□ -0.53
BgnP28653 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 Gm6888-201ENSMUST00000221983 706 ntBASIC11.71□□□□□ -0.53
BgnP28653 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 Gm26035-201ENSMUST00000083065 308 ntBASIC11.71□□□□□ -0.53
BgnP28653 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
BgnP28653 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BgnP28653 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
BgnP28653 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
BgnP28653 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.71□□□□□ -0.54
BgnP28653 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BgnP28653 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.71□□□□□ -0.54
BgnP28653 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
BgnP28653 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BgnP28653 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BgnP28653 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
BgnP28653 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BgnP28653 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
BgnP28653 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
BgnP28653 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.7□□□□□ -0.54
BgnP28653 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
BgnP28653 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.7□□□□□ -0.54
BgnP28653 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
BgnP28653 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.7□□□□□ -0.54
BgnP28653 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.7□□□□□ -0.54
BgnP28653 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
BgnP28653 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.7□□□□□ -0.54
BgnP28653 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
BgnP28653 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Mir686-201ENSMUST00000102174 109 ntBASIC11.7□□□□□ -0.54
BgnP28653 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.7□□□□□ -0.54
BgnP28653 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.7□□□□□ -0.54
BgnP28653 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.7□□□□□ -0.54
BgnP28653 Gm14767-201ENSMUST00000121559 586 ntBASIC11.7□□□□□ -0.54
BgnP28653 Gm26464-201ENSMUST00000157094 305 ntBASIC11.7□□□□□ -0.54
BgnP28653 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
BgnP28653 Gm9630-201ENSMUST00000178304 885 ntBASIC11.7□□□□□ -0.54
BgnP28653 Gm27680-201ENSMUST00000184192 160 ntBASIC11.7□□□□□ -0.54
BgnP28653 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.7□□□□□ -0.54
BgnP28653 Gm26315-201ENSMUST00000083890 321 ntBASIC11.7□□□□□ -0.54
BgnP28653 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.7□□□□□ -0.54
BgnP28653 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.7□□□□□ -0.54
BgnP28653 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.7□□□□□ -0.54
BgnP28653 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
BgnP28653 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BgnP28653 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
BgnP28653 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.69□□□□□ -0.54
BgnP28653 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BgnP28653 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.69□□□□□ -0.54
BgnP28653 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BgnP28653 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.69□□□□□ -0.54
BgnP28653 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
BgnP28653 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
BgnP28653 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BgnP28653 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms