Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nfkb1P25799 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nfkb1P25799 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nfkb1P25799 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nfkb1P25799 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Nfkb1P25799 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nfkb1P25799 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nfkb1P25799 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nfkb1P25799 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.03□□□□□ -0.32
Nfkb1P25799 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nfkb1P25799 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nfkb1P25799 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nfkb1P25799 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nfkb1P25799 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Nfkb1P25799 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nfkb1P25799 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Nfkb1P25799 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nfkb1P25799 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Nfkb1P25799 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nfkb1P25799 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm24830-201ENSMUST00000102024 166 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.02□□□□□ -0.33
Nfkb1P25799 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm25043-201ENSMUST00000158604 212 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm25890-201ENSMUST00000177643 165 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm22614-201ENSMUST00000178300 165 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm2383-201ENSMUST00000181461 807 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.02□□□□□ -0.33
Nfkb1P25799 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.02□□□□□ -0.33
Nfkb1P25799 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.02□□□□□ -0.33
Nfkb1P25799 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm22042-201ENSMUST00000082989 165 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm26232-201ENSMUST00000083360 166 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm24136-201ENSMUST00000083374 165 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm26110-201ENSMUST00000083971 165 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nfkb1P25799 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Nfkb1P25799 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.02□□□□□ -0.33
Nfkb1P25799 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.02□□□□□ -0.33
Nfkb1P25799 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Nfkb1P25799 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nfkb1P25799 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.02□□□□□ -0.33
Nfkb1P25799 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nfkb1P25799 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.01□□□□□ -0.33
Nfkb1P25799 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Nfkb1P25799 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Nfkb1P25799 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Nfkb1P25799 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.01□□□□□ -0.33
Nfkb1P25799 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nfkb1P25799 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.01□□□□□ -0.33
Nfkb1P25799 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Nfkb1P25799 Gm13813-201ENSMUST00000120998 787 ntBASIC13.01□□□□□ -0.33
Nfkb1P25799 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nfkb1P25799 Gm8018-201ENSMUST00000173536 789 ntBASIC13.01□□□□□ -0.33
Nfkb1P25799 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Nfkb1P25799 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.01□□□□□ -0.33
Nfkb1P25799 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.01□□□□□ -0.33
Nfkb1P25799 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.01□□□□□ -0.33
Nfkb1P25799 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nfkb1P25799 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms