Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm3P21107 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm3P21107 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm3P21107 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm3P21107 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tpm3P21107 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tpm3P21107 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Tpm3P21107 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.16□□□□□ -0.14
Tpm3P21107 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.16□□□□□ -0.14
Tpm3P21107 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.16□□□□□ -0.14
Tpm3P21107 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tpm3P21107 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.16□□□□□ -0.14
Tpm3P21107 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.16□□□□□ -0.14
Tpm3P21107 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.16□□□□□ -0.14
Tpm3P21107 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.16□□□□□ -0.14
Tpm3P21107 Gm24513-201ENSMUST00000174964 138 ntBASIC14.16□□□□□ -0.14
Tpm3P21107 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Tpm3P21107 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.16□□□□□ -0.14
Tpm3P21107 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.16□□□□□ -0.14
Tpm3P21107 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tpm3P21107 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tpm3P21107 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tpm3P21107 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tpm3P21107 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm3P21107 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tpm3P21107 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.15□□□□□ -0.14
Tpm3P21107 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.15□□□□□ -0.14
Tpm3P21107 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.15□□□□□ -0.14
Tpm3P21107 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.15□□□□□ -0.14
Tpm3P21107 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.15□□□□□ -0.14
Tpm3P21107 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.15□□□□□ -0.14
Tpm3P21107 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.15□□□□□ -0.14
Tpm3P21107 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.15□□□□□ -0.14
Tpm3P21107 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.15□□□□□ -0.14
Tpm3P21107 Gm27397-201ENSMUST00000184997 107 ntBASIC14.15□□□□□ -0.14
Tpm3P21107 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tpm3P21107 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tpm3P21107 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm3P21107 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Tpm3P21107 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.15□□□□□ -0.15
Tpm3P21107 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm3P21107 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm3P21107 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm3P21107 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm3P21107 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm3P21107 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm3P21107 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm3P21107 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm3P21107 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.14□□□□□ -0.15
Tpm3P21107 Gm4995-201ENSMUST00000117247 432 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms