Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Gm11597-201ENSMUST00000121423 964 ntBASIC12.11□□□□□ -0.47
Hoxb9P20615 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.11□□□□□ -0.47
Hoxb9P20615 Mir1982-201ENSMUST00000157368 74 ntBASIC12.11□□□□□ -0.47
Hoxb9P20615 Gm16379-201ENSMUST00000161469 348 ntBASIC12.11□□□□□ -0.47
Hoxb9P20615 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxb9P20615 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.11□□□□□ -0.47
Hoxb9P20615 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.11□□□□□ -0.47
Hoxb9P20615 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.11□□□□□ -0.47
Hoxb9P20615 Gm8762-201ENSMUST00000193486 339 ntBASIC12.11□□□□□ -0.47
Hoxb9P20615 Gm5781-201ENSMUST00000219792 443 ntBASIC12.11□□□□□ -0.47
Hoxb9P20615 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.11□□□□□ -0.47
Hoxb9P20615 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Gm22058-201ENSMUST00000083393 310 ntBASIC12.11□□□□□ -0.47
Hoxb9P20615 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hoxb9P20615 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Hoxb9P20615 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxb9P20615 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.11□□□□□ -0.47
Hoxb9P20615 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxb9P20615 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hoxb9P20615 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hoxb9P20615 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.1□□□□□ -0.47
Hoxb9P20615 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Hoxb9P20615 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hoxb9P20615 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxb9P20615 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Hoxb9P20615 Gm13736-201ENSMUST00000119272 253 ntBASIC12.1□□□□□ -0.47
Hoxb9P20615 Gm15824-201ENSMUST00000119516 955 ntBASIC12.1□□□□□ -0.47
Hoxb9P20615 Gm13315-201ENSMUST00000120376 991 ntBASIC12.1□□□□□ -0.47
Hoxb9P20615 Rmrp-201ENSMUST00000157463 271 ntBASIC12.1□□□□□ -0.47
Hoxb9P20615 Snora78-201ENSMUST00000158630 128 ntBASIC12.1□□□□□ -0.47
Hoxb9P20615 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxb9P20615 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxb9P20615 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.1□□□□□ -0.47
Hoxb9P20615 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.1□□□□□ -0.47
Hoxb9P20615 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.1□□□□□ -0.47
Hoxb9P20615 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.1□□□□□ -0.47
Hoxb9P20615 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxb9P20615 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxb9P20615 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hoxb9P20615 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxb9P20615 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxb9P20615 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxb9P20615 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxb9P20615 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxb9P20615 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.09□□□□□ -0.47
Hoxb9P20615 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxb9P20615 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxb9P20615 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxb9P20615 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxb9P20615 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxb9P20615 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.09□□□□□ -0.47
Hoxb9P20615 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.09□□□□□ -0.47
Hoxb9P20615 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxb9P20615 Gm43433-201ENSMUST00000196573 481 ntBASIC12.09□□□□□ -0.47
Hoxb9P20615 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxb9P20615 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.09□□□□□ -0.47
Hoxb9P20615 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxb9P20615 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxb9P20615 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms