Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cdx1P18111 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.26□□□□□ -0.77
Cdx1P18111 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.26□□□□□ -0.77
Cdx1P18111 Gm10275-202ENSMUST00000168697 495 ntBASIC10.26□□□□□ -0.77
Cdx1P18111 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.26□□□□□ -0.77
Cdx1P18111 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.26□□□□□ -0.77
Cdx1P18111 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Gm6916-202ENSMUST00000205523 195 ntBASIC10.26□□□□□ -0.77
Cdx1P18111 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Gm18624-201ENSMUST00000220966 658 ntBASIC10.26□□□□□ -0.77
Cdx1P18111 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.26□□□□□ -0.77
Cdx1P18111 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Cdx1P18111 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Cdx1P18111 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Cdx1P18111 Gm10275-201ENSMUST00000092620 635 ntBASIC10.26□□□□□ -0.77
Cdx1P18111 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Cdx1P18111 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.26□□□□□ -0.77
Cdx1P18111 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cdx1P18111 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.26□□□□□ -0.77
Cdx1P18111 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cdx1P18111 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.26□□□□□ -0.77
Cdx1P18111 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx1P18111 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.25□□□□□ -0.77
Cdx1P18111 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Cdx1P18111 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.25□□□□□ -0.77
Cdx1P18111 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.25□□□□□ -0.77
Cdx1P18111 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cdx1P18111 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.25□□□□□ -0.77
Cdx1P18111 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Cdx1P18111 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Cdx1P18111 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Cdx1P18111 Gm11918-201ENSMUST00000121660 179 ntBASIC10.25□□□□□ -0.77
Cdx1P18111 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.25□□□□□ -0.77
Cdx1P18111 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.25□□□□□ -0.77
Cdx1P18111 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Cdx1P18111 Mir6392-201ENSMUST00000184924 108 ntBASIC10.25□□□□□ -0.77
Cdx1P18111 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.25□□□□□ -0.77
Cdx1P18111 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC10.25□□□□□ -0.77
Cdx1P18111 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.25□□□□□ -0.77
Cdx1P18111 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.25□□□□□ -0.77
Cdx1P18111 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.25□□□□□ -0.77
Cdx1P18111 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.25□□□□□ -0.77
Cdx1P18111 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.25□□□□□ -0.77
Cdx1P18111 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.25□□□□□ -0.77
Cdx1P18111 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx1P18111 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms