Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.15□□□□□ -0.46
Cntn1P12960 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.15□□□□□ -0.46
Cntn1P12960 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Cntn1P12960 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Gm24255-201ENSMUST00000104481 128 ntBASIC12.15□□□□□ -0.46
Cntn1P12960 Gm13875-201ENSMUST00000120162 282 ntBASIC12.15□□□□□ -0.46
Cntn1P12960 Gm11964-201ENSMUST00000120982 444 ntBASIC12.15□□□□□ -0.46
Cntn1P12960 Gm14381-201ENSMUST00000122105 414 ntBASIC12.15□□□□□ -0.46
Cntn1P12960 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.15□□□□□ -0.46
Cntn1P12960 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cntn1P12960 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Gm2546-201ENSMUST00000182630 991 ntBASIC12.15□□□□□ -0.46
Cntn1P12960 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.15□□□□□ -0.46
Cntn1P12960 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.15□□□□□ -0.46
Cntn1P12960 Gm37259-201ENSMUST00000193903 849 ntBASIC12.15□□□□□ -0.46
Cntn1P12960 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.15□□□□□ -0.46
Cntn1P12960 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.15□□□□□ -0.46
Cntn1P12960 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.15□□□□□ -0.46
Cntn1P12960 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.15□□□□□ -0.46
Cntn1P12960 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cntn1P12960 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cntn1P12960 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cntn1P12960 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cntn1P12960 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cntn1P12960 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cntn1P12960 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Cntn1P12960 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Cntn1P12960 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.14□□□□□ -0.47
Cntn1P12960 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.14□□□□□ -0.47
Cntn1P12960 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Cntn1P12960 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Cntn1P12960 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Cntn1P12960 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.14□□□□□ -0.47
Cntn1P12960 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cntn1P12960 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cntn1P12960 Gm16296-201ENSMUST00000159905 325 ntBASIC12.14□□□□□ -0.47
Cntn1P12960 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.14□□□□□ -0.47
Cntn1P12960 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.14□□□□□ -0.47
Cntn1P12960 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.14□□□□□ -0.47
Cntn1P12960 Gm21769-201ENSMUST00000211922 111 ntBASIC12.14□□□□□ -0.47
Cntn1P12960 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cntn1P12960 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cntn1P12960 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cntn1P12960 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cntn1P12960 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.14□□□□□ -0.47
Cntn1P12960 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cntn1P12960 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.14□□□□□ -0.47
Cntn1P12960 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.13□□□□□ -0.47
Cntn1P12960 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cntn1P12960 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cntn1P12960 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms