Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc6P10629 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hoxc6P10629 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Hoxc6P10629 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14□□□□□ -0.17
Hoxc6P10629 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14□□□□□ -0.17
Hoxc6P10629 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14□□□□□ -0.17
Hoxc6P10629 Gm27438-201ENSMUST00000183480 110 ntBASIC14□□□□□ -0.17
Hoxc6P10629 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14□□□□□ -0.17
Hoxc6P10629 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14□□□□□ -0.17
Hoxc6P10629 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Gm44551-201ENSMUST00000208804 171 ntBASIC14□□□□□ -0.17
Hoxc6P10629 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14□□□□□ -0.17
Hoxc6P10629 AC154305.4-201ENSMUST00000224520 614 ntBASIC14□□□□□ -0.17
Hoxc6P10629 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14□□□□□ -0.17
Hoxc6P10629 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hoxc6P10629 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hoxc6P10629 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Gm44065-201ENSMUST00000203184 3527 ntBASIC14□□□□□ -0.17
Hoxc6P10629 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Gm6198-201ENSMUST00000191337 2929 ntBASIC14□□□□□ -0.17
Hoxc6P10629 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hoxc6P10629 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc6P10629 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hoxc6P10629 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hoxc6P10629 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.99□□□□□ -0.17
Hoxc6P10629 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.99□□□□□ -0.17
Hoxc6P10629 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.99□□□□□ -0.17
Hoxc6P10629 Gm13035-201ENSMUST00000117496 342 ntBASIC13.99□□□□□ -0.17
Hoxc6P10629 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.99□□□□□ -0.17
Hoxc6P10629 Gm11941-201ENSMUST00000119904 610 ntBASIC13.99□□□□□ -0.17
Hoxc6P10629 Gm12208-201ENSMUST00000122004 163 ntBASIC13.99□□□□□ -0.17
Hoxc6P10629 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.99□□□□□ -0.17
Hoxc6P10629 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.99□□□□□ -0.17
Hoxc6P10629 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.99□□□□□ -0.17
Hoxc6P10629 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc6P10629 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.99□□□□□ -0.17
Hoxc6P10629 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hoxc6P10629 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.98□□□□□ -0.17
Hoxc6P10629 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc6P10629 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.98□□□□□ -0.17
Hoxc6P10629 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc6P10629 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc6P10629 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc6P10629 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc6P10629 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc6P10629 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.98□□□□□ -0.17
Hoxc6P10629 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc6P10629 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc6P10629 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Hoxc6P10629 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Hoxc6P10629 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Hoxc6P10629 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc6P10629 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc6P10629 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.98□□□□□ -0.17
Hoxc6P10629 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc6P10629 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc6P10629 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.98□□□□□ -0.17
Hoxc6P10629 Gm18038-201ENSMUST00000197900 485 ntBASIC13.98□□□□□ -0.17
Hoxc6P10629 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc6P10629 Gm8285-201ENSMUST00000208293 759 ntBASIC13.98□□□□□ -0.17
Hoxc6P10629 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc6P10629 Gm9996-201ENSMUST00000070359 913 ntBASIC13.98□□□□□ -0.17
Hoxc6P10629 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms