Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nid1P10493 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Nid1P10493 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nid1P10493 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.85□□□□□ -0.51
Nid1P10493 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.85□□□□□ -0.51
Nid1P10493 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nid1P10493 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.85□□□□□ -0.51
Nid1P10493 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Nid1P10493 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.85□□□□□ -0.51
Nid1P10493 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.85□□□□□ -0.51
Nid1P10493 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nid1P10493 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Nid1P10493 Gm11964-201ENSMUST00000120982 444 ntBASIC11.85□□□□□ -0.51
Nid1P10493 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.85□□□□□ -0.51
Nid1P10493 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.85□□□□□ -0.51
Nid1P10493 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Nid1P10493 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nid1P10493 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.85□□□□□ -0.51
Nid1P10493 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.85□□□□□ -0.51
Nid1P10493 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nid1P10493 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Nid1P10493 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.84□□□□□ -0.51
Nid1P10493 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Nid1P10493 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.84□□□□□ -0.51
Nid1P10493 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Gm29127-201ENSMUST00000188304 517 ntBASIC11.84□□□□□ -0.51
Nid1P10493 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.84□□□□□ -0.51
Nid1P10493 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Nid1P10493 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.84□□□□□ -0.51
Nid1P10493 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Nid1P10493 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nid1P10493 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Nid1P10493 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nid1P10493 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.84□□□□□ -0.51
Nid1P10493 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.84□□□□□ -0.51
Nid1P10493 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.84□□□□□ -0.51
Nid1P10493 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.84□□□□□ -0.51
Nid1P10493 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nid1P10493 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nid1P10493 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.83□□□□□ -0.52
Nid1P10493 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nid1P10493 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nid1P10493 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms