Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.39□□□□□ -0.27
Hoxc8P09025 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.39□□□□□ -0.27
Hoxc8P09025 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxc8P09025 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hoxc8P09025 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxc8P09025 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc8P09025 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Hoxc8P09025 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc8P09025 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Hoxc8P09025 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Hoxc8P09025 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc8P09025 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc8P09025 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc8P09025 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc8P09025 Gm26286-201ENSMUST00000104166 134 ntBASIC13.38□□□□□ -0.27
Hoxc8P09025 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc8P09025 Gm12501-201ENSMUST00000119163 529 ntBASIC13.38□□□□□ -0.27
Hoxc8P09025 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.38□□□□□ -0.27
Hoxc8P09025 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.38□□□□□ -0.27
Hoxc8P09025 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.38□□□□□ -0.27
Hoxc8P09025 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.38□□□□□ -0.27
Hoxc8P09025 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc8P09025 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc8P09025 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.38□□□□□ -0.27
Hoxc8P09025 Gm3332-201ENSMUST00000189337 928 ntBASIC13.38□□□□□ -0.27
Hoxc8P09025 Gm5733-201ENSMUST00000190232 939 ntBASIC13.38□□□□□ -0.27
Hoxc8P09025 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.38□□□□□ -0.27
Hoxc8P09025 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Hoxc8P09025 Gm8285-201ENSMUST00000208293 759 ntBASIC13.38□□□□□ -0.27
Hoxc8P09025 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Hoxc8P09025 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.38□□□□□ -0.27
Hoxc8P09025 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc8P09025 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Hoxc8P09025 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc8P09025 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Hoxc8P09025 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc8P09025 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc8P09025 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.37□□□□□ -0.27
Hoxc8P09025 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Hoxc8P09025 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hoxc8P09025 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Hoxc8P09025 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hoxc8P09025 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.37□□□□□ -0.27
Hoxc8P09025 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.37□□□□□ -0.27
Hoxc8P09025 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.37□□□□□ -0.27
Hoxc8P09025 Rprl1-201ENSMUST00000158050 327 ntBASIC13.37□□□□□ -0.27
Hoxc8P09025 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.37□□□□□ -0.27
Hoxc8P09025 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hoxc8P09025 Gm3508-201ENSMUST00000186012 792 ntBASIC13.37□□□□□ -0.27
Hoxc8P09025 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Gm26448-201ENSMUST00000082446 203 ntBASIC13.37□□□□□ -0.27
Hoxc8P09025 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hoxc8P09025 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Hoxc8P09025 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.37□□□□□ -0.27
Hoxc8P09025 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hoxc8P09025 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.37□□□□□ -0.27
Hoxc8P09025 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.37□□□□□ -0.27
Hoxc8P09025 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hoxc8P09025 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hoxc8P09025 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.37□□□□□ -0.27
Hoxc8P09025 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.37□□□□□ -0.27
Hoxc8P09025 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc8P09025 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.36□□□□□ -0.27
Hoxc8P09025 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Hoxc8P09025 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.36□□□□□ -0.27
Hoxc8P09025 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.36□□□□□ -0.27
Hoxc8P09025 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc8P09025 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms