Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.41□□□□□ -0.26
TnfP06804 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Gm12314-201ENSMUST00000118104 538 ntBASIC13.41□□□□□ -0.26
TnfP06804 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Gm28882-201ENSMUST00000185504 314 ntBASIC13.41□□□□□ -0.26
TnfP06804 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.41□□□□□ -0.26
TnfP06804 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.41□□□□□ -0.26
TnfP06804 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.41□□□□□ -0.26
TnfP06804 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.41□□□□□ -0.26
TnfP06804 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.41□□□□□ -0.26
TnfP06804 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.41□□□□□ -0.26
TnfP06804 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TnfP06804 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.41□□□□□ -0.26
TnfP06804 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TnfP06804 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.41□□□□□ -0.26
TnfP06804 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.41□□□□□ -0.26
TnfP06804 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TnfP06804 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TnfP06804 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.41□□□□□ -0.26
TnfP06804 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TnfP06804 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.4□□□□□ -0.26
TnfP06804 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.4□□□□□ -0.26
TnfP06804 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
TnfP06804 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TnfP06804 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TnfP06804 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.4□□□□□ -0.26
TnfP06804 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.4□□□□□ -0.26
TnfP06804 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Gm24845-201ENSMUST00000158034 109 ntBASIC13.4□□□□□ -0.26
TnfP06804 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
TnfP06804 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.4□□□□□ -0.26
TnfP06804 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.4□□□□□ -0.26
TnfP06804 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.4□□□□□ -0.26
TnfP06804 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Gm10312-201ENSMUST00000078515 489 ntBASIC13.4□□□□□ -0.26
TnfP06804 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.4□□□□□ -0.26
TnfP06804 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TnfP06804 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.4□□□□□ -0.26
TnfP06804 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
TnfP06804 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TnfP06804 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TnfP06804 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
TnfP06804 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TnfP06804 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.39□□□□□ -0.27
TnfP06804 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.39□□□□□ -0.27
TnfP06804 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.39□□□□□ -0.27
TnfP06804 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.39□□□□□ -0.27
TnfP06804 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TnfP06804 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms