Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04213 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
P04213 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.11□□□□□ -0.47
P04213 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
P04213 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.11□□□□□ -0.47
P04213 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
P04213 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P04213 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.11□□□□□ -0.47
P04213 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P04213 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
P04213 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.11□□□□□ -0.47
P04213 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.11□□□□□ -0.47
P04213 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
P04213 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.11□□□□□ -0.47
P04213 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P04213 Gm9630-201ENSMUST00000178304 885 ntBASIC12.11□□□□□ -0.47
P04213 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.11□□□□□ -0.47
P04213 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.11□□□□□ -0.47
P04213 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P04213 Daam2-202ENSMUST00000224595 1926 ntBASIC12.11□□□□□ -0.47
P04213 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P04213 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04213 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.1□□□□□ -0.47
P04213 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P04213 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Gm11478-201ENSMUST00000117851 599 ntBASIC12.1□□□□□ -0.47
P04213 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
P04213 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
P04213 Gm26927-201ENSMUST00000182385 965 ntBASIC12.1□□□□□ -0.47
P04213 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.1□□□□□ -0.47
P04213 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.1□□□□□ -0.47
P04213 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.1□□□□□ -0.47
P04213 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
P04213 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.1□□□□□ -0.47
P04213 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
P04213 Gm10268-201ENSMUST00000085340 555 ntBASIC12.1□□□□□ -0.47
P04213 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.1□□□□□ -0.47
P04213 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.1□□□□□ -0.47
P04213 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
P04213 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.1□□□□□ -0.47
P04213 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.1□□□□□ -0.47
P04213 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04213 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms