Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.76□□□□□ -0.85
P03980 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
P03980 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
P03980 Gm7063-201ENSMUST00000186840 981 ntBASIC9.76□□□□□ -0.85
P03980 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
P03980 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.76□□□□□ -0.85
P03980 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.76□□□□□ -0.85
P03980 AC132863.2-201ENSMUST00000226643 799 ntBASIC9.76□□□□□ -0.85
P03980 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
P03980 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
P03980 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 Mir339-201ENSMUST00000083659 96 ntBASIC9.76□□□□□ -0.85
P03980 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
P03980 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
P03980 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.76□□□□□ -0.85
P03980 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
P03980 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
P03980 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.76□□□□□ -0.85
P03980 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P03980 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC9.75□□□□□ -0.85
P03980 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
P03980 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
P03980 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
P03980 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
P03980 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 AC154517.2-201ENSMUST00000220829 2458 ntBASIC9.75□□□□□ -0.85
P03980 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
P03980 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
P03980 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
P03980 Gm5687-201ENSMUST00000118252 640 ntBASIC9.75□□□□□ -0.85
P03980 Gm12151-201ENSMUST00000121374 290 ntBASIC9.75□□□□□ -0.85
P03980 Gm14719-201ENSMUST00000121891 340 ntBASIC9.75□□□□□ -0.85
P03980 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC9.75□□□□□ -0.85
P03980 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.75□□□□□ -0.85
P03980 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC9.75□□□□□ -0.85
P03980 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Gm44397-201ENSMUST00000195950 113 ntBASIC9.75□□□□□ -0.85
P03980 Gm45195-201ENSMUST00000205597 1008 ntBASIC9.75□□□□□ -0.85
P03980 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC9.75□□□□□ -0.85
P03980 Gm6983-201ENSMUST00000214912 628 ntBASIC9.75□□□□□ -0.85
P03980 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
P03980 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
P03980 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
P03980 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
P03980 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
P03980 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.75□□□□□ -0.85
P03980 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
P03980 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.74□□□□□ -0.85
P03980 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P03980 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P03980 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
P03980 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P03980 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
P03980 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
P03980 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.74□□□□□ -0.85
P03980 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC9.74□□□□□ -0.85
P03980 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P03980 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
P03980 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.74□□□□□ -0.85
P03980 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P03980 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P03980 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P03980 Gm15321-201ENSMUST00000121290 288 ntBASIC9.74□□□□□ -0.85
P03980 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P03980 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms