Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.25□□□□□ -0.93
TcraP01849 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.25□□□□□ -0.93
TcraP01849 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
TcraP01849 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.25□□□□□ -0.93
TcraP01849 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Fgf17-202ENSMUST00000227123 1336 ntBASIC9.25□□□□□ -0.93
TcraP01849 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.25□□□□□ -0.93
TcraP01849 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TcraP01849 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.24□□□□□ -0.93
TcraP01849 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.24□□□□□ -0.93
TcraP01849 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.24□□□□□ -0.93
TcraP01849 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.24□□□□□ -0.93
TcraP01849 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
TcraP01849 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
TcraP01849 Gm15393-201ENSMUST00000120499 219 ntBASIC9.24□□□□□ -0.93
TcraP01849 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
TcraP01849 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.24□□□□□ -0.93
TcraP01849 Gm27622-201ENSMUST00000183779 60 ntBASIC9.24□□□□□ -0.93
TcraP01849 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC9.24□□□□□ -0.93
TcraP01849 Gm43575-201ENSMUST00000196420 516 ntBASIC9.24□□□□□ -0.93
TcraP01849 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC9.24□□□□□ -0.93
TcraP01849 AC124732.2-201ENSMUST00000221977 316 ntBASIC9.24□□□□□ -0.93
TcraP01849 AC154621.1-201ENSMUST00000226155 1119 ntBASIC9.24□□□□□ -0.93
TcraP01849 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
TcraP01849 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
TcraP01849 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.24□□□□□ -0.93
TcraP01849 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
TcraP01849 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
TcraP01849 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.24□□□□□ -0.93
TcraP01849 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.24□□□□□ -0.93
TcraP01849 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
TcraP01849 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
TcraP01849 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
TcraP01849 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC9.24□□□□□ -0.93
TcraP01849 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
TcraP01849 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.24□□□□□ -0.93
TcraP01849 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TcraP01849 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.23□□□□□ -0.93
TcraP01849 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.23□□□□□ -0.93
TcraP01849 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC9.23□□□□□ -0.93
TcraP01849 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC9.23□□□□□ -0.93
TcraP01849 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Gm15460-201ENSMUST00000118147 391 ntBASIC9.23□□□□□ -0.93
TcraP01849 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.23□□□□□ -0.93
TcraP01849 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
TcraP01849 Gm25948-201ENSMUST00000175334 112 ntBASIC9.23□□□□□ -0.93
TcraP01849 Gm21470-201ENSMUST00000187680 696 ntBASIC9.23□□□□□ -0.93
TcraP01849 Gm28630-201ENSMUST00000187806 498 ntBASIC9.23□□□□□ -0.93
TcraP01849 Gm44124-201ENSMUST00000204159 472 ntBASIC9.23□□□□□ -0.93
TcraP01849 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms