Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC9.9□□□□□ -0.82
P01728 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P01728 Gm5687-201ENSMUST00000118252 640 ntBASIC9.9□□□□□ -0.82
P01728 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.9□□□□□ -0.82
P01728 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.9□□□□□ -0.82
P01728 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC9.9□□□□□ -0.82
P01728 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
P01728 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC9.9□□□□□ -0.82
P01728 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P01728 Gm42929-201ENSMUST00000198374 1286 ntBASIC9.9□□□□□ -0.82
P01728 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC9.9□□□□□ -0.82
P01728 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P01728 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P01728 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P01728 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.9□□□□□ -0.82
P01728 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P01728 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.9□□□□□ -0.82
P01728 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P01728 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
P01728 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P01728 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.9□□□□□ -0.82
P01728 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
P01728 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P01728 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
P01728 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
P01728 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P01728 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
P01728 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
P01728 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
P01728 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
P01728 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
P01728 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
P01728 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
P01728 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
P01728 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
P01728 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
P01728 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
P01728 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.83
P01728 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
P01728 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
P01728 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
P01728 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
P01728 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
P01728 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC9.89□□□□□ -0.83
P01728 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
P01728 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
P01728 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
P01728 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
P01728 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
P01728 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC9.89□□□□□ -0.83
P01728 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC9.89□□□□□ -0.83
P01728 Gm15703-201ENSMUST00000120250 880 ntBASIC9.89□□□□□ -0.83
P01728 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Gm28693-202ENSMUST00000190758 331 ntBASIC9.89□□□□□ -0.83
P01728 AC155258.1-201ENSMUST00000219303 253 ntBASIC9.89□□□□□ -0.83
P01728 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Gm9797-201ENSMUST00000052902 613 ntBASIC9.89□□□□□ -0.83
P01728 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
P01728 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.89□□□□□ -0.83
P01728 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
P01728 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
P01728 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
P01728 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
P01728 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms