Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.47□□□□□ -0.57
DhfrP00375 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.47□□□□□ -0.57
DhfrP00375 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.47□□□□□ -0.57
DhfrP00375 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
DhfrP00375 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.47□□□□□ -0.57
DhfrP00375 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.47□□□□□ -0.57
DhfrP00375 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Gm38144-201ENSMUST00000192790 465 ntBASIC11.47□□□□□ -0.57
DhfrP00375 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.47□□□□□ -0.57
DhfrP00375 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.47□□□□□ -0.57
DhfrP00375 Gm45668-201ENSMUST00000211271 493 ntBASIC11.47□□□□□ -0.57
DhfrP00375 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.47□□□□□ -0.57
DhfrP00375 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
DhfrP00375 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.47□□□□□ -0.57
DhfrP00375 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Gm5161-201ENSMUST00000075243 853 ntBASIC11.47□□□□□ -0.57
DhfrP00375 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.47□□□□□ -0.57
DhfrP00375 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
DhfrP00375 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
DhfrP00375 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
DhfrP00375 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.47□□□□□ -0.57
DhfrP00375 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
DhfrP00375 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.47□□□□□ -0.57
DhfrP00375 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DhfrP00375 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.46□□□□□ -0.57
DhfrP00375 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.46□□□□□ -0.57
DhfrP00375 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.46□□□□□ -0.57
DhfrP00375 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
DhfrP00375 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
DhfrP00375 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
DhfrP00375 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.46□□□□□ -0.57
DhfrP00375 Gm12341-201ENSMUST00000119724 503 ntBASIC11.46□□□□□ -0.57
DhfrP00375 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.46□□□□□ -0.57
DhfrP00375 Gm12091-201ENSMUST00000146791 830 ntBASIC11.46□□□□□ -0.57
DhfrP00375 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.46□□□□□ -0.57
DhfrP00375 Gm26464-201ENSMUST00000157094 305 ntBASIC11.46□□□□□ -0.57
DhfrP00375 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.46□□□□□ -0.57
DhfrP00375 Gm38223-201ENSMUST00000194484 695 ntBASIC11.46□□□□□ -0.57
DhfrP00375 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.46□□□□□ -0.57
DhfrP00375 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.46□□□□□ -0.57
DhfrP00375 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.46□□□□□ -0.57
DhfrP00375 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.46□□□□□ -0.57
DhfrP00375 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DhfrP00375 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
DhfrP00375 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
DhfrP00375 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
DhfrP00375 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
DhfrP00375 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
DhfrP00375 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
DhfrP00375 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
DhfrP00375 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
DhfrP00375 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.46□□□□□ -0.58
DhfrP00375 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DhfrP00375 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DhfrP00375 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.45□□□□□ -0.58
DhfrP00375 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
DhfrP00375 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DhfrP00375 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
DhfrP00375 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DhfrP00375 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DhfrP00375 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
DhfrP00375 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms