Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Vti1aO89116 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Vti1aO89116 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Vti1aO89116 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1aO89116 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vti1aO89116 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Vti1aO89116 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.68□□□□□ -0.22
Vti1aO89116 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.68□□□□□ -0.22
Vti1aO89116 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vti1aO89116 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.68□□□□□ -0.22
Vti1aO89116 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.68□□□□□ -0.22
Vti1aO89116 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.68□□□□□ -0.22
Vti1aO89116 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.68□□□□□ -0.22
Vti1aO89116 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.68□□□□□ -0.22
Vti1aO89116 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.68□□□□□ -0.22
Vti1aO89116 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.68□□□□□ -0.22
Vti1aO89116 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.68□□□□□ -0.22
Vti1aO89116 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.68□□□□□ -0.22
Vti1aO89116 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.68□□□□□ -0.22
Vti1aO89116 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vti1aO89116 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.68□□□□□ -0.22
Vti1aO89116 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vti1aO89116 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Vti1aO89116 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.68□□□□□ -0.22
Vti1aO89116 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vti1aO89116 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vti1aO89116 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.67□□□□□ -0.22
Vti1aO89116 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vti1aO89116 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.67□□□□□ -0.22
Vti1aO89116 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.67□□□□□ -0.22
Vti1aO89116 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.67□□□□□ -0.22
Vti1aO89116 Gm11978-201ENSMUST00000122315 466 ntBASIC13.67□□□□□ -0.22
Vti1aO89116 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.67□□□□□ -0.22
Vti1aO89116 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.67□□□□□ -0.22
Vti1aO89116 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.67□□□□□ -0.22
Vti1aO89116 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.67□□□□□ -0.22
Vti1aO89116 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vti1aO89116 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.67□□□□□ -0.22
Vti1aO89116 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vti1aO89116 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vti1aO89116 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Vti1aO89116 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.66□□□□□ -0.22
Vti1aO89116 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.66□□□□□ -0.22
Vti1aO89116 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.66□□□□□ -0.22
Vti1aO89116 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.66□□□□□ -0.22
Vti1aO89116 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.66□□□□□ -0.22
Vti1aO89116 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.66□□□□□ -0.22
Vti1aO89116 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.66□□□□□ -0.22
Vti1aO89116 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms