Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ubr1O70481 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Ubr1O70481 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 Gm11246-201ENSMUST00000120880 345 ntBASIC16.1■□□□□ 0.17
Ubr1O70481 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ubr1O70481 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC16.1■□□□□ 0.17
Ubr1O70481 Gm12407-201ENSMUST00000180219 324 ntBASIC16.1■□□□□ 0.17
Ubr1O70481 Ighv1-48-201ENSMUST00000191795 294 ntBASIC16.1■□□□□ 0.17
Ubr1O70481 Gm37458-201ENSMUST00000194055 410 ntBASIC16.1■□□□□ 0.17
Ubr1O70481 Gm9463-201ENSMUST00000206707 601 ntBASIC16.1■□□□□ 0.17
Ubr1O70481 Gm45575-201ENSMUST00000210283 548 ntBASIC16.1■□□□□ 0.17
Ubr1O70481 AC112945.1-201ENSMUST00000226413 514 ntBASIC16.1■□□□□ 0.17
Ubr1O70481 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubr1O70481 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Ubr1O70481 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ubr1O70481 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubr1O70481 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubr1O70481 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubr1O70481 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC16.09■□□□□ 0.17
Ubr1O70481 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubr1O70481 Gm2420-201ENSMUST00000119864 2149 ntBASIC16.09■□□□□ 0.17
Ubr1O70481 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubr1O70481 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ubr1O70481 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ubr1O70481 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubr1O70481 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.09■□□□□ 0.17
Ubr1O70481 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubr1O70481 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ubr1O70481 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC16.09■□□□□ 0.17
Ubr1O70481 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC16.09■□□□□ 0.17
Ubr1O70481 Gm38151-201ENSMUST00000195085 289 ntBASIC16.09■□□□□ 0.17
Ubr1O70481 Gm43520-201ENSMUST00000197996 164 ntBASIC16.09■□□□□ 0.17
Ubr1O70481 Gm17831-201ENSMUST00000205579 900 ntBASIC16.09■□□□□ 0.17
Ubr1O70481 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubr1O70481 Gm45550-201ENSMUST00000209380 946 ntBASIC16.09■□□□□ 0.17
Ubr1O70481 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubr1O70481 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubr1O70481 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ubr1O70481 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Ubr1O70481 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ubr1O70481 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Ubr1O70481 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.08■□□□□ 0.17
Ubr1O70481 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ubr1O70481 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ubr1O70481 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC16.08■□□□□ 0.17
Ubr1O70481 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ubr1O70481 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ubr1O70481 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC16.08■□□□□ 0.17
Ubr1O70481 Gm18636-201ENSMUST00000218846 1066 ntBASIC16.08■□□□□ 0.17
Ubr1O70481 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ubr1O70481 Gm43267-201ENSMUST00000199664 1796 ntBASIC16.08■□□□□ 0.17
Ubr1O70481 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ubr1O70481 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ubr1O70481 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.08■□□□□ 0.16
Ubr1O70481 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.08■□□□□ 0.16
Ubr1O70481 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.08■□□□□ 0.16
Ubr1O70481 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Gm18782-201ENSMUST00000209023 1399 ntBASIC16.08■□□□□ 0.16
Ubr1O70481 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC16.08■□□□□ 0.16
Ubr1O70481 AC123834.1-201ENSMUST00000225346 2043 ntBASIC16.08■□□□□ 0.16
Ubr1O70481 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Gm43807-201ENSMUST00000200678 1781 ntBASIC16.08■□□□□ 0.16
Ubr1O70481 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ubr1O70481 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC16.08■□□□□ 0.16
Ubr1O70481 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Gm12899-201ENSMUST00000120565 551 ntBASIC16.08■□□□□ 0.16
Ubr1O70481 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Gm22138-201ENSMUST00000158748 128 ntBASIC16.08■□□□□ 0.16
Ubr1O70481 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Ubr1O70481 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Gm37905-201ENSMUST00000195310 341 ntBASIC16.08■□□□□ 0.16
Ubr1O70481 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC16.08■□□□□ 0.16
Ubr1O70481 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ubr1O70481 Gm44260-201ENSMUST00000204946 2094 ntBASIC16.07■□□□□ 0.16
Ubr1O70481 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms