Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Slc1a6O35544 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Slc1a6O35544 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Slc1a6O35544 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Slc1a6O35544 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Slc1a6O35544 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.45□□□□□ -0.42
Slc1a6O35544 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Slc1a6O35544 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.45□□□□□ -0.42
Slc1a6O35544 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.45□□□□□ -0.42
Slc1a6O35544 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.45□□□□□ -0.42
Slc1a6O35544 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.45□□□□□ -0.42
Slc1a6O35544 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc1a6O35544 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.45□□□□□ -0.42
Slc1a6O35544 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.45□□□□□ -0.42
Slc1a6O35544 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.45□□□□□ -0.42
Slc1a6O35544 Map1b-203ENSMUST00000223725 2669 ntBASIC12.45□□□□□ -0.42
Slc1a6O35544 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.44□□□□□ -0.42
Slc1a6O35544 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Gm15429-201ENSMUST00000151268 798 ntBASIC12.44□□□□□ -0.42
Slc1a6O35544 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Mir7654-201ENSMUST00000185082 70 ntBASIC12.44□□□□□ -0.42
Slc1a6O35544 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.44□□□□□ -0.42
Slc1a6O35544 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.44□□□□□ -0.42
Slc1a6O35544 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.44□□□□□ -0.42
Slc1a6O35544 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slc1a6O35544 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.44□□□□□ -0.42
Slc1a6O35544 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.43□□□□□ -0.42
Slc1a6O35544 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc1a6O35544 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc1a6O35544 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Slc1a6O35544 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc1a6O35544 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc1a6O35544 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc1a6O35544 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc1a6O35544 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Slc1a6O35544 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc1a6O35544 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc1a6O35544 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.43□□□□□ -0.42
Slc1a6O35544 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc1a6O35544 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms