Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.01□□□□□ -0.81
Efnb3O35393 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.01□□□□□ -0.81
Efnb3O35393 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.01□□□□□ -0.81
Efnb3O35393 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Efnb3O35393 Gm7488-201ENSMUST00000117148 684 ntBASIC10.01□□□□□ -0.81
Efnb3O35393 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Efnb3O35393 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.01□□□□□ -0.81
Efnb3O35393 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Efnb3O35393 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Efnb3O35393 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.01□□□□□ -0.81
Efnb3O35393 Gm27390-201ENSMUST00000184516 176 ntBASIC10.01□□□□□ -0.81
Efnb3O35393 Gm28760-201ENSMUST00000185995 736 ntBASIC10.01□□□□□ -0.81
Efnb3O35393 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Efnb3O35393 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.01□□□□□ -0.81
Efnb3O35393 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.01□□□□□ -0.81
Efnb3O35393 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Efnb3O35393 Gm19220-201ENSMUST00000222682 803 ntBASIC10.01□□□□□ -0.81
Efnb3O35393 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Efnb3O35393 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.01□□□□□ -0.81
Efnb3O35393 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.01□□□□□ -0.81
Efnb3O35393 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Efnb3O35393 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.01□□□□□ -0.81
Efnb3O35393 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.01□□□□□ -0.81
Efnb3O35393 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.01□□□□□ -0.81
Efnb3O35393 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.01□□□□□ -0.81
Efnb3O35393 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Efnb3O35393 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10□□□□□ -0.81
Efnb3O35393 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Efnb3O35393 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Efnb3O35393 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10□□□□□ -0.81
Efnb3O35393 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10□□□□□ -0.81
Efnb3O35393 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10□□□□□ -0.81
Efnb3O35393 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
Efnb3O35393 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10□□□□□ -0.81
Efnb3O35393 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10□□□□□ -0.81
Efnb3O35393 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Efnb3O35393 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10□□□□□ -0.81
Efnb3O35393 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10□□□□□ -0.81
Efnb3O35393 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Efnb3O35393 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10□□□□□ -0.81
Efnb3O35393 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Efnb3O35393 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Efnb3O35393 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Efnb3O35393 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.99□□□□□ -0.81
Efnb3O35393 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms