Protein–RNA interactions for Protein: O08786

Cckar, Cholecystokinin receptor type A, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckarO08786 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.19□□□□□ -0.62
CckarO08786 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Mir6927-201ENSMUST00000184494 71 ntBASIC11.19□□□□□ -0.62
CckarO08786 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.19□□□□□ -0.62
CckarO08786 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Gm37986-201ENSMUST00000193285 383 ntBASIC11.19□□□□□ -0.62
CckarO08786 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.19□□□□□ -0.62
CckarO08786 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.19□□□□□ -0.62
CckarO08786 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
CckarO08786 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.19□□□□□ -0.62
CckarO08786 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.19□□□□□ -0.62
CckarO08786 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckarO08786 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CckarO08786 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CckarO08786 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.18□□□□□ -0.62
CckarO08786 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
CckarO08786 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.18□□□□□ -0.62
CckarO08786 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.18□□□□□ -0.62
CckarO08786 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CckarO08786 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.18□□□□□ -0.62
CckarO08786 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.18□□□□□ -0.62
CckarO08786 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.18□□□□□ -0.62
CckarO08786 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.18□□□□□ -0.62
CckarO08786 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.18□□□□□ -0.62
CckarO08786 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Gm25214-201ENSMUST00000104573 129 ntBASIC11.18□□□□□ -0.62
CckarO08786 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
CckarO08786 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.18□□□□□ -0.62
CckarO08786 Gm12566-201ENSMUST00000121479 359 ntBASIC11.18□□□□□ -0.62
CckarO08786 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.18□□□□□ -0.62
CckarO08786 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Gm22121-201ENSMUST00000175148 54 ntBASIC11.18□□□□□ -0.62
CckarO08786 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.18□□□□□ -0.62
CckarO08786 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.18□□□□□ -0.62
CckarO08786 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
CckarO08786 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckarO08786 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
CckarO08786 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.17□□□□□ -0.62
CckarO08786 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.17□□□□□ -0.62
CckarO08786 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CckarO08786 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CckarO08786 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.17□□□□□ -0.62
CckarO08786 Gm11930-201ENSMUST00000117788 190 ntBASIC11.17□□□□□ -0.62
CckarO08786 Gm14704-201ENSMUST00000120300 874 ntBASIC11.17□□□□□ -0.62
CckarO08786 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.17□□□□□ -0.62
CckarO08786 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.17□□□□□ -0.62
CckarO08786 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.17□□□□□ -0.62
CckarO08786 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CckarO08786 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
CckarO08786 Gm27046-201ENSMUST00000182160 463 ntBASIC11.17□□□□□ -0.62
CckarO08786 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.17□□□□□ -0.62
CckarO08786 AA914427-201ENSMUST00000193194 1166 ntBASIC11.17□□□□□ -0.62
CckarO08786 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms