Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Gm29705-201ENSMUST00000212598 474 ntBASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Gm19163-201ENSMUST00000223313 780 ntBASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf11bO08712 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Gm15703-201ENSMUST00000120250 880 ntBASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Gm15806-201ENSMUST00000120696 955 ntBASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Gm12363-201ENSMUST00000122250 668 ntBASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Gm4768-201ENSMUST00000206199 686 ntBASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Gm32025-201ENSMUST00000217960 307 ntBASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf11bO08712 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.83□□□□□ -0.35
Tnfrsf11bO08712 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Tnfrsf11bO08712 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Gm4271-201ENSMUST00000174444 973 ntBASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Gm27486-201ENSMUST00000184923 80 ntBASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Matn2-203ENSMUST00000226766 3252 ntBASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf11bO08712 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Tnfrsf11bO08712 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf11bO08712 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf11bO08712 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf11bO08712 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms