Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Raet1cO08604 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Raet1cO08604 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Raet1cO08604 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Raet1cO08604 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Raet1cO08604 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Raet1cO08604 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.31□□□□□ -0.6
Raet1cO08604 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.31□□□□□ -0.6
Raet1cO08604 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Raet1cO08604 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Raet1cO08604 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Raet1cO08604 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Raet1cO08604 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.31□□□□□ -0.6
Raet1cO08604 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.31□□□□□ -0.6
Raet1cO08604 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.31□□□□□ -0.6
Raet1cO08604 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Raet1cO08604 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Raet1cO08604 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Raet1cO08604 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Raet1cO08604 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.3□□□□□ -0.6
Raet1cO08604 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Raet1cO08604 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Raet1cO08604 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.3□□□□□ -0.6
Raet1cO08604 Gm17150-201ENSMUST00000165577 381 ntBASIC11.3□□□□□ -0.6
Raet1cO08604 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Gm32025-201ENSMUST00000217960 307 ntBASIC11.3□□□□□ -0.6
Raet1cO08604 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.3□□□□□ -0.6
Raet1cO08604 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.3□□□□□ -0.6
Raet1cO08604 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Gm10268-201ENSMUST00000085340 555 ntBASIC11.3□□□□□ -0.6
Raet1cO08604 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.3□□□□□ -0.6
Raet1cO08604 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.3□□□□□ -0.6
Raet1cO08604 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.3□□□□□ -0.6
Raet1cO08604 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.3□□□□□ -0.6
Raet1cO08604 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Raet1cO08604 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.3□□□□□ -0.6
Raet1cO08604 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Raet1cO08604 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.3□□□□□ -0.6
Raet1cO08604 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1cO08604 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Raet1cO08604 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Raet1cO08604 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.29□□□□□ -0.6
Raet1cO08604 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Raet1cO08604 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Raet1cO08604 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Raet1cO08604 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Raet1cO08604 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Raet1cO08604 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Gm1335-201ENSMUST00000121653 386 ntBASIC11.29□□□□□ -0.6
Raet1cO08604 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Gm26927-201ENSMUST00000182385 965 ntBASIC11.29□□□□□ -0.6
Raet1cO08604 Gm27682-201ENSMUST00000183930 110 ntBASIC11.29□□□□□ -0.6
Raet1cO08604 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.29□□□□□ -0.6
Raet1cO08604 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.29□□□□□ -0.6
Raet1cO08604 Gm43818-201ENSMUST00000200605 466 ntBASIC11.29□□□□□ -0.6
Raet1cO08604 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.29□□□□□ -0.6
Raet1cO08604 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1cO08604 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms