Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcf11G3X9Z4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcf11G3X9Z4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC18.83■□□□□ 0.61
Pcf11G3X9Z4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcf11G3X9Z4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcf11G3X9Z4 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC18.83■□□□□ 0.6
Pcf11G3X9Z4 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC18.83■□□□□ 0.6
Pcf11G3X9Z4 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcf11G3X9Z4 Gm5705-201ENSMUST00000066241 711 ntBASIC18.83■□□□□ 0.6
Pcf11G3X9Z4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcf11G3X9Z4 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pcf11G3X9Z4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcf11G3X9Z4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcf11G3X9Z4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcf11G3X9Z4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcf11G3X9Z4 Gm44999-201ENSMUST00000207456 1493 ntBASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Gm16166-201ENSMUST00000118291 787 ntBASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Gm14724-201ENSMUST00000118400 537 ntBASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Gm5733-201ENSMUST00000190232 939 ntBASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcf11G3X9Z4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Gm8365-201ENSMUST00000197334 648 ntBASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Ssr1-203ENSMUST00000225246 1825 ntBASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Gm11511-201ENSMUST00000118146 540 ntBASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Gm9540-201ENSMUST00000188230 478 ntBASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Gm10774-201ENSMUST00000188689 204 ntBASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Gm42629-201ENSMUST00000199063 1102 ntBASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcf11G3X9Z4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcf11G3X9Z4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms