Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.16■□□□□ 0.02
Ube4aE9Q735 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Gm24934-201ENSMUST00000103764 111 ntBASIC15.16■□□□□ 0.02
Ube4aE9Q735 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC15.16■□□□□ 0.02
Ube4aE9Q735 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 AU022133-201ENSMUST00000200601 873 ntBASIC15.16■□□□□ 0.02
Ube4aE9Q735 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.16■□□□□ 0.02
Ube4aE9Q735 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.16■□□□□ 0.02
Ube4aE9Q735 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4aE9Q735 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Gm23949-201ENSMUST00000104027 127 ntBASIC15.15■□□□□ 0.02
Ube4aE9Q735 Gm12380-201ENSMUST00000119012 544 ntBASIC15.15■□□□□ 0.02
Ube4aE9Q735 Gm14760-201ENSMUST00000121831 999 ntBASIC15.15■□□□□ 0.02
Ube4aE9Q735 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Gm22902-201ENSMUST00000158488 302 ntBASIC15.15■□□□□ 0.02
Ube4aE9Q735 Mir3547-201ENSMUST00000175461 88 ntBASIC15.15■□□□□ 0.02
Ube4aE9Q735 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Gm27627-201ENSMUST00000183644 150 ntBASIC15.15■□□□□ 0.02
Ube4aE9Q735 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15.15■□□□□ 0.02
Ube4aE9Q735 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC15.15■□□□□ 0.02
Ube4aE9Q735 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4aE9Q735 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.15■□□□□ 0.02
Ube4aE9Q735 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ube4aE9Q735 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4aE9Q735 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15.14■□□□□ 0.01
Ube4aE9Q735 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Gm43378-201ENSMUST00000199336 582 ntBASIC15.14■□□□□ 0.01
Ube4aE9Q735 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Ube4aE9Q735 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.13■□□□□ 0.01
Ube4aE9Q735 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms