Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Cpsf4lE9Q2N0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cpsf4lE9Q2N0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cpsf4lE9Q2N0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cpsf4lE9Q2N0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Cpsf4lE9Q2N0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cpsf4lE9Q2N0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Gm6023-201ENSMUST00000118217 606 ntBASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Gm27572-201ENSMUST00000183702 255 ntBASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.71□□□□□ -0.69
Cpsf4lE9Q2N0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.71□□□□□ -0.7
Cpsf4lE9Q2N0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Cpsf4lE9Q2N0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cpsf4lE9Q2N0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Cpsf4lE9Q2N0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cpsf4lE9Q2N0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Cpsf4lE9Q2N0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Gm13392-201ENSMUST00000117708 150 ntBASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Gm14760-201ENSMUST00000121831 999 ntBASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Gm17420-201ENSMUST00000164753 153 ntBASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Gm38158-201ENSMUST00000194617 339 ntBASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Gm18054-201ENSMUST00000207539 555 ntBASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Gm9823-201ENSMUST00000051212 327 ntBASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cpsf4lE9Q2N0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms