Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Gm14109-201ENSMUST00000118814 309 ntBASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Gm13813-201ENSMUST00000120998 787 ntBASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Srp54bE9PXC0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Gm14130-201ENSMUST00000118417 987 ntBASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Gm45186-201ENSMUST00000206874 478 ntBASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Gm18212-201ENSMUST00000211678 889 ntBASIC12.49□□□□□ -0.41
Srp54bE9PXC0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms