Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm5071-201ENSMUST00000104922 1035 ntBASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Gm43106-201ENSMUST00000199485 637 ntBASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Gm5292-201ENSMUST00000073317 580 ntBASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a3E9PWQ3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a3E9PWQ3 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.27□□□□□ -0.44
Col6a3E9PWQ3 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.27□□□□□ -0.44
Col6a3E9PWQ3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a3E9PWQ3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a3E9PWQ3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a3E9PWQ3 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a3E9PWQ3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Gm27149-201ENSMUST00000184716 1266 ntBASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Gm6755-201ENSMUST00000100598 864 ntBASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Gm6740-201ENSMUST00000100617 864 ntBASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a3E9PWQ3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm11540-201ENSMUST00000117457 780 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm14524-201ENSMUST00000121066 683 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm8197-202ENSMUST00000193422 934 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm44216-201ENSMUST00000203942 157 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm9487-201ENSMUST00000216600 472 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 AC154354.1-203ENSMUST00000225565 1364 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm18304-201ENSMUST00000189162 546 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm8181-201ENSMUST00000062242 669 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm5451-201ENSMUST00000080545 579 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Mir341-201ENSMUST00000093593 96 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms