Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Gm22920-201ENSMUST00000102175 109 ntBASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Gm5714-201ENSMUST00000197343 566 ntBASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Gm13182-201ENSMUST00000122241 312 ntBASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hfm1D3Z4R1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Hfm1D3Z4R1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hfm1D3Z4R1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hfm1D3Z4R1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Gm43267-201ENSMUST00000199664 1796 ntBASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Gm12628-201ENSMUST00000122193 382 ntBASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Gm9645-201ENSMUST00000197131 792 ntBASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 AC166344.1-201ENSMUST00000223745 674 ntBASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hfm1D3Z4R1 Gm9361-201ENSMUST00000198695 1507 ntBASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Gm7537-201ENSMUST00000221660 1414 ntBASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Gm4654-201ENSMUST00000183305 982 ntBASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 AC154184.3-201ENSMUST00000225620 1090 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms