Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Gm14381-201ENSMUST00000122105 414 ntBASIC17.1■□□□□ 0.33
Tmf1B9EKI3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Gm13570-201ENSMUST00000140763 309 ntBASIC17.1■□□□□ 0.33
Tmf1B9EKI3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tmf1B9EKI3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Gm18304-201ENSMUST00000189162 546 ntBASIC17.09■□□□□ 0.33
Tmf1B9EKI3 AC113031.8-201ENSMUST00000227856 631 ntBASIC17.09■□□□□ 0.33
Tmf1B9EKI3 AC169036.1-201ENSMUST00000227994 296 ntBASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Gm37844-201ENSMUST00000192473 4097 ntBASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tmf1B9EKI3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmf1B9EKI3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmf1B9EKI3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmf1B9EKI3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmf1B9EKI3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmf1B9EKI3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmf1B9EKI3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tmf1B9EKI3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tmf1B9EKI3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tmf1B9EKI3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Tmf1B9EKI3 Gm23270-201ENSMUST00000104055 131 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms