Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Gm4875-201ENSMUST00000118257 786 ntBASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Gm14767-201ENSMUST00000121559 586 ntBASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Gm11978-201ENSMUST00000122315 466 ntBASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Gm26464-201ENSMUST00000157094 305 ntBASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Gm27680-201ENSMUST00000184192 160 ntBASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm12887B1AVM1 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Gm42550-201ENSMUST00000201553 960 ntBASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Gm8227-201ENSMUST00000223306 571 ntBASIC10.21□□□□□ -0.77
Gm12887B1AVM1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Gm12887B1AVM1 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm12887B1AVM1 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms