Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Gm22334-201ENSMUST00000158070 133 ntBASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 AY036118-201ENSMUST00000200021 923 ntBASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Gm4607-201ENSMUST00000206649 577 ntBASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn3aA2ASI5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Gm12196-201ENSMUST00000120954 262 ntBASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Gm27530-201ENSMUST00000184096 98 ntBASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.98□□□□□ -0.17
Scn3aA2ASI5 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Gm8959-201ENSMUST00000213150 571 ntBASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn3aA2ASI5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.97□□□□□ -0.17
Scn3aA2ASI5 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms