Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Tmed9-203ENSMUST00000224741 1450 ntBASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm7336-201ENSMUST00000107041 1232 ntBASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 AW822252-206ENSMUST00000208904 237 ntBASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm17330-201ENSMUST00000221047 165 ntBASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm5320-201ENSMUST00000207163 1519 ntBASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm14452-201ENSMUST00000118680 1632 ntBASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm27680-201ENSMUST00000184192 160 ntBASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm35960-201ENSMUST00000202712 767 ntBASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm43045-201ENSMUST00000198725 2095 ntBASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms