Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Gm7029-201ENSMUST00000173226 450 ntBASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Gm26927-201ENSMUST00000182385 965 ntBASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.19□□□□□ -0.46
Cldn9Q9Z0S7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Gm16296-201ENSMUST00000159905 325 ntBASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Gm9630-201ENSMUST00000178304 885 ntBASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldn9Q9Z0S7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Gm29127-201ENSMUST00000188304 517 ntBASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Gm24526-201ENSMUST00000082921 158 ntBASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Gm10268-201ENSMUST00000085340 555 ntBASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms