Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Gm14832-201ENSMUST00000121289 322 ntBASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Gm14017-201ENSMUST00000121934 386 ntBASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Gm16570-201ENSMUST00000161951 436 ntBASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Gm18212-201ENSMUST00000211678 889 ntBASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smarcb1Q9Z0H3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Gm12015-201ENSMUST00000117065 843 ntBASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Gm26361-201ENSMUST00000158868 186 ntBASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Gm39404-201ENSMUST00000216350 313 ntBASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcb1Q9Z0H3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms