Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.2□□□□□ -0.14
AmfrQ9R049 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
AmfrQ9R049 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
AmfrQ9R049 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.19□□□□□ -0.14
AmfrQ9R049 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.19□□□□□ -0.14
AmfrQ9R049 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.19□□□□□ -0.14
AmfrQ9R049 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.19□□□□□ -0.14
AmfrQ9R049 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.19□□□□□ -0.14
AmfrQ9R049 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.19□□□□□ -0.14
AmfrQ9R049 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.19□□□□□ -0.14
AmfrQ9R049 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.19□□□□□ -0.14
AmfrQ9R049 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.19□□□□□ -0.14
AmfrQ9R049 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.19□□□□□ -0.14
AmfrQ9R049 Gm28693-202ENSMUST00000190758 331 ntBASIC14.19□□□□□ -0.14
AmfrQ9R049 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.19□□□□□ -0.14
AmfrQ9R049 Gm19309-201ENSMUST00000218295 205 ntBASIC14.19□□□□□ -0.14
AmfrQ9R049 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Gm9899-201ENSMUST00000065519 555 ntBASIC14.19□□□□□ -0.14
AmfrQ9R049 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AmfrQ9R049 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.18□□□□□ -0.14
AmfrQ9R049 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.18□□□□□ -0.14
AmfrQ9R049 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.18□□□□□ -0.14
AmfrQ9R049 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.18□□□□□ -0.14
AmfrQ9R049 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.18□□□□□ -0.14
AmfrQ9R049 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.18□□□□□ -0.14
AmfrQ9R049 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Gm10268-201ENSMUST00000085340 555 ntBASIC14.18□□□□□ -0.14
AmfrQ9R049 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
AmfrQ9R049 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
AmfrQ9R049 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
AmfrQ9R049 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
AmfrQ9R049 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AmfrQ9R049 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
AmfrQ9R049 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
AmfrQ9R049 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.17□□□□□ -0.14
AmfrQ9R049 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.17□□□□□ -0.14
AmfrQ9R049 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
AmfrQ9R049 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Mir686-201ENSMUST00000102174 109 ntBASIC14.17□□□□□ -0.14
AmfrQ9R049 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.17□□□□□ -0.14
AmfrQ9R049 Gm12742-201ENSMUST00000117326 410 ntBASIC14.17□□□□□ -0.14
AmfrQ9R049 Gm13392-201ENSMUST00000117708 150 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms