Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Gm8805-201ENSMUST00000117848 313 ntBASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Gm12203-201ENSMUST00000118235 598 ntBASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Gm12209-201ENSMUST00000120089 596 ntBASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Gm22331-201ENSMUST00000158066 136 ntBASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a2Q9JLR1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Gm15824-201ENSMUST00000119516 955 ntBASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.43□□□□□ -0.58
Sec61a2Q9JLR1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms