Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Gm13453-201ENSMUST00000118708 357 ntBASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn5Q9JL35 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Gm38294-201ENSMUST00000192831 381 ntBASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Gm38223-201ENSMUST00000194484 695 ntBASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Gm42599-201ENSMUST00000201308 469 ntBASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn5Q9JL35 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Gm17837-201ENSMUST00000186435 985 ntBASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn5Q9JL35 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms