Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Gm10434-201ENSMUST00000101158 471 ntBASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Gm12314-201ENSMUST00000118104 538 ntBASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Gm12058-201ENSMUST00000118614 437 ntBASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Gm13875-201ENSMUST00000120162 282 ntBASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Olfr284-202ENSMUST00000206647 966 ntBASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Gm6013-201ENSMUST00000212264 699 ntBASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Gm7046-201ENSMUST00000221351 977 ntBASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Gm27243-201ENSMUST00000183964 521 ntBASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Gm29396-201ENSMUST00000185659 716 ntBASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Gm18304-201ENSMUST00000189162 546 ntBASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3aQ9JKX8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gm27501-201ENSMUST00000183599 107 ntBASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms