Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Gm6963-201ENSMUST00000147879 379 ntBASIC12.42□□□□□ -0.42
Rrp8Q9DB85 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Gm28882-201ENSMUST00000185504 314 ntBASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.42□□□□□ -0.42
Rrp8Q9DB85 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp8Q9DB85 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Gm12266-201ENSMUST00000120311 962 ntBASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Gm14832-201ENSMUST00000121289 322 ntBASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Gm24749-201ENSMUST00000157838 343 ntBASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Gm16296-201ENSMUST00000159905 325 ntBASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Gm5523-201ENSMUST00000180415 997 ntBASIC12.41□□□□□ -0.42
Rrp8Q9DB85 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Gm17812-201ENSMUST00000204935 318 ntBASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp8Q9DB85 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm12616-201ENSMUST00000118594 382 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm13461-201ENSMUST00000120980 662 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm24845-201ENSMUST00000158034 109 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm17040-202ENSMUST00000170597 889 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm20426-201ENSMUST00000173657 440 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm12624-201ENSMUST00000177615 382 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm12621-201ENSMUST00000177760 382 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm12615-201ENSMUST00000177970 382 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm12622-201ENSMUST00000177975 382 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm12627-201ENSMUST00000178412 382 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm12625-201ENSMUST00000179122 382 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm12614-201ENSMUST00000179586 382 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm12613-201ENSMUST00000180323 382 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms