Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Gm44124-201ENSMUST00000204159 472 ntBASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Gm28630-201ENSMUST00000187806 498 ntBASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Gm43474-201ENSMUST00000196415 774 ntBASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Sf3a3Q9D554 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms