Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.85□□□□□ -0.03
Rufy3Q9D394 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rufy3Q9D394 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.84□□□□□ -0.03
Rufy3Q9D394 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Gm29649-201ENSMUST00000185649 419 ntBASIC14.84□□□□□ -0.03
Rufy3Q9D394 Gm29127-201ENSMUST00000188304 517 ntBASIC14.84□□□□□ -0.03
Rufy3Q9D394 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.84□□□□□ -0.03
Rufy3Q9D394 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Daam2-202ENSMUST00000224595 1926 ntBASIC14.84□□□□□ -0.03
Rufy3Q9D394 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rufy3Q9D394 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.83□□□□□ -0.03
Rufy3Q9D394 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.83□□□□□ -0.03
Rufy3Q9D394 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rufy3Q9D394 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.83□□□□□ -0.03
Rufy3Q9D394 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Rufy3Q9D394 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.83□□□□□ -0.03
Rufy3Q9D394 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rufy3Q9D394 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.83□□□□□ -0.04
Rufy3Q9D394 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Gm26927-201ENSMUST00000182385 965 ntBASIC14.83□□□□□ -0.04
Rufy3Q9D394 Gm27682-201ENSMUST00000183930 110 ntBASIC14.83□□□□□ -0.04
Rufy3Q9D394 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.83□□□□□ -0.04
Rufy3Q9D394 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.83□□□□□ -0.04
Rufy3Q9D394 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.83□□□□□ -0.04
Rufy3Q9D394 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rufy3Q9D394 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rufy3Q9D394 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.82□□□□□ -0.04
Rufy3Q9D394 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rufy3Q9D394 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rufy3Q9D394 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rufy3Q9D394 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.82□□□□□ -0.04
Rufy3Q9D394 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rufy3Q9D394 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rufy3Q9D394 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.82□□□□□ -0.04
Rufy3Q9D394 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rufy3Q9D394 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Rufy3Q9D394 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rufy3Q9D394 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.82□□□□□ -0.04
Rufy3Q9D394 Gm11478-201ENSMUST00000117851 599 ntBASIC14.82□□□□□ -0.04
Rufy3Q9D394 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rufy3Q9D394 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.82□□□□□ -0.04
Rufy3Q9D394 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rufy3Q9D394 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms