Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldnd1Q9CQX5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Cldnd1Q9CQX5 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.93□□□□□ -0.34
Cldnd1Q9CQX5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldnd1Q9CQX5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldnd1Q9CQX5 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cldnd1Q9CQX5 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Cldnd1Q9CQX5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldnd1Q9CQX5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Cldnd1Q9CQX5 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cldnd1Q9CQX5 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.93□□□□□ -0.34
Cldnd1Q9CQX5 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cldnd1Q9CQX5 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Gm23596-201ENSMUST00000104304 132 ntBASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Rmrp-201ENSMUST00000157463 271 ntBASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Gm9358-201ENSMUST00000183067 927 ntBASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Gm28324-201ENSMUST00000187913 264 ntBASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Gm5733-201ENSMUST00000190232 939 ntBASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cldnd1Q9CQX5 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Gm7666-201ENSMUST00000146631 819 ntBASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Gm807-202ENSMUST00000224929 408 ntBASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cldnd1Q9CQX5 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms