Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Gm5279-201ENSMUST00000199575 745 ntBASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
TpbpbQ9CQC0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Gm7775-201ENSMUST00000218871 853 ntBASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TpbpbQ9CQC0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.3□□□□□ -0.6
TpbpbQ9CQC0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TpbpbQ9CQC0 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.3□□□□□ -0.6
TpbpbQ9CQC0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.3□□□□□ -0.6
TpbpbQ9CQC0 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.3□□□□□ -0.6
TpbpbQ9CQC0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TpbpbQ9CQC0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TpbpbQ9CQC0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TpbpbQ9CQC0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms