Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Gm29615-201ENSMUST00000185371 697 ntBASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Gm28224-201ENSMUST00000186078 697 ntBASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Gm29001-201ENSMUST00000186177 697 ntBASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Gm28292-201ENSMUST00000186593 697 ntBASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Gm28101-201ENSMUST00000187608 697 ntBASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Gm29076-201ENSMUST00000187689 697 ntBASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Gm28302-201ENSMUST00000187931 697 ntBASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Gm28646-201ENSMUST00000188220 697 ntBASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Gm28205-201ENSMUST00000189177 697 ntBASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Gm29032-201ENSMUST00000189797 697 ntBASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Gm28695-201ENSMUST00000190300 697 ntBASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Gm37448-201ENSMUST00000192795 697 ntBASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Gm8959-201ENSMUST00000213150 571 ntBASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim34aQ99PP6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.59■□□□□ 0.09
Trim34aQ99PP6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim34aQ99PP6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Trim34aQ99PP6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim34aQ99PP6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trim34aQ99PP6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim34aQ99PP6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Gm27627-201ENSMUST00000183644 150 ntBASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Gm9230-201ENSMUST00000188228 532 ntBASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Gm37666-201ENSMUST00000194110 866 ntBASIC15.58■□□□□ 0.08
Trim34aQ99PP6 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Trim34aQ99PP6 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms