Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Gm37744-201ENSMUST00000194616 1590 ntBASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Gm13888-201ENSMUST00000119148 422 ntBASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Gm14832-201ENSMUST00000121289 322 ntBASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Gm45219-201ENSMUST00000205602 465 ntBASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Gm45598-202ENSMUST00000210719 986 ntBASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-1Q99MA9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Matn2-206ENSMUST00000228570 2798 ntBASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Gm12015-201ENSMUST00000117065 843 ntBASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Gm15711-201ENSMUST00000118889 535 ntBASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Gm8018-201ENSMUST00000173536 789 ntBASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms